Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK1BO75841 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 AC004945.1-201ENST00000416738 983 ntBASIC13.63□□□□□ -0.23
UPK1BO75841 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.63□□□□□ -0.23
UPK1BO75841 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.63□□□□□ -0.23
UPK1BO75841 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
UPK1BO75841 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK1BO75841 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 AC011467.4-201ENST00000594891 528 ntBASIC13.63□□□□□ -0.23
UPK1BO75841 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.63□□□□□ -0.23
UPK1BO75841 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK1BO75841 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK1BO75841 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UPK1BO75841 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.63□□□□□ -0.23
UPK1BO75841 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UPK1BO75841 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK1BO75841 AC004241.5-201ENST00000623870 2448 ntBASIC13.63□□□□□ -0.23
UPK1BO75841 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK1BO75841 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK1BO75841 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK1BO75841 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
UPK1BO75841 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK1BO75841 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UPK1BO75841 KRT8P24-201ENST00000560290 1559 ntBASIC13.62□□□□□ -0.23
UPK1BO75841 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 CYP2D8P-201ENST00000433633 1490 ntBASIC13.62□□□□□ -0.23
UPK1BO75841 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.62□□□□□ -0.23
UPK1BO75841 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK1BO75841 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.62□□□□□ -0.23
UPK1BO75841 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.62□□□□□ -0.23
UPK1BO75841 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
UPK1BO75841 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UPK1BO75841 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK1BO75841 AC073548.1-201ENST00000624088 1882 ntBASIC13.62□□□□□ -0.23
UPK1BO75841 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.62□□□□□ -0.23
UPK1BO75841 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 AC093724.1-201ENST00000448659 1027 ntBASIC13.62□□□□□ -0.23
UPK1BO75841 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.62□□□□□ -0.23
UPK1BO75841 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UPK1BO75841 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
UPK1BO75841 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.62□□□□□ -0.23
UPK1BO75841 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.62□□□□□ -0.23
UPK1BO75841 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.62□□□□□ -0.23
UPK1BO75841 AC073592.4-201ENST00000623827 446 ntBASIC13.62□□□□□ -0.23
UPK1BO75841 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
UPK1BO75841 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UPK1BO75841 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UPK1BO75841 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 AL118506.1-201ENST00000601296 3082 ntBASIC13.62□□□□□ -0.23
UPK1BO75841 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK1BO75841 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UPK1BO75841 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK1BO75841 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
UPK1BO75841 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.62□□□□□ -0.23
UPK1BO75841 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.61□□□□□ -0.23
UPK1BO75841 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms