Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RHOQP3-201ENST00000437982 621 ntBASIC12.26□□□□□ -0.45
ZNF253O75346 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.26□□□□□ -0.45
ZNF253O75346 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ZNF253O75346 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.26□□□□□ -0.45
ZNF253O75346 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.26□□□□□ -0.45
ZNF253O75346 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF253O75346 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ZNF253O75346 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF253O75346 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ZNF253O75346 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF253O75346 PMS2P7-201ENST00000506558 1336 ntBASIC12.26□□□□□ -0.45
ZNF253O75346 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.26□□□□□ -0.45
ZNF253O75346 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 AL390755.1-201ENST00000623716 2027 ntBASIC12.26□□□□□ -0.45
ZNF253O75346 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
ZNF253O75346 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ZNF253O75346 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ZNF253O75346 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF253O75346 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF253O75346 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 AC073439.1-201ENST00000624121 1774 ntBASIC12.25□□□□□ -0.45
ZNF253O75346 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 AC010327.5-201ENST00000586923 3061 ntBASIC12.25□□□□□ -0.45
ZNF253O75346 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ZNF253O75346 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 MIR1224-201ENST00000408193 85 ntBASIC12.25□□□□□ -0.45
ZNF253O75346 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.25□□□□□ -0.45
ZNF253O75346 AC140658.5-201ENST00000438532 169 ntBASIC12.25□□□□□ -0.45
ZNF253O75346 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.25□□□□□ -0.45
ZNF253O75346 UNC93B6-202ENST00000528242 690 ntBASIC12.25□□□□□ -0.45
ZNF253O75346 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.25□□□□□ -0.45
ZNF253O75346 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF253O75346 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF253O75346 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
ZNF253O75346 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ZNF253O75346 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms