Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 NUS1P1-201ENST00000446295 882 ntBASIC13.63□□□□□ -0.23
HMX3A6NHT5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.63□□□□□ -0.23
HMX3A6NHT5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
HMX3A6NHT5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.63□□□□□ -0.23
HMX3A6NHT5 AP001269.4-201ENST00000609611 512 ntBASIC13.63□□□□□ -0.23
HMX3A6NHT5 AC020765.3-201ENST00000613051 740 ntBASIC13.63□□□□□ -0.23
HMX3A6NHT5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HMX3A6NHT5 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.63□□□□□ -0.23
HMX3A6NHT5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
HMX3A6NHT5 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.63□□□□□ -0.23
HMX3A6NHT5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMX3A6NHT5 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 TOP3BP1-201ENST00000420768 1380 ntBASIC13.62□□□□□ -0.23
HMX3A6NHT5 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 HAUS4P1-201ENST00000406739 1145 ntBASIC13.62□□□□□ -0.23
HMX3A6NHT5 ACTG1P4-201ENST00000425123 1122 ntBASIC13.62□□□□□ -0.23
HMX3A6NHT5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 MIR3652-201ENST00000579335 131 ntBASIC13.62□□□□□ -0.23
HMX3A6NHT5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
HMX3A6NHT5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMX3A6NHT5 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 AC015909.5-201ENST00000624336 2266 ntBASIC13.61□□□□□ -0.23
HMX3A6NHT5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 BX005266.1-201ENST00000473402 457 ntBASIC13.61□□□□□ -0.23
HMX3A6NHT5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.61□□□□□ -0.23
HMX3A6NHT5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 AP005117.1-201ENST00000584346 1413 ntBASIC13.61□□□□□ -0.23
HMX3A6NHT5 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMX3A6NHT5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HMX3A6NHT5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms