Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 TSSK5P-201ENST00000423978 907 ntBASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 AC241585.1-201ENST00000433527 519 ntBASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 AC092183.1-201ENST00000469884 875 ntBASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 SDHAP3-202ENST00000515467 728 ntBASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 AC074044.1-201ENST00000609673 707 ntBASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 AC023157.3-201ENST00000619086 2088 ntBASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 AC055876.3-201ENST00000431496 288 ntBASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 AC138649.4-201ENST00000612222 287 ntBASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 AL390754.1-201ENST00000619088 582 ntBASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC162PA2VCL2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 KRT8P44-201ENST00000441609 1350 ntBASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC162PA2VCL2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms