Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 AC007551.1-201ENST00000457394 519 ntBASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 AC093433.1-201ENST00000458048 571 ntBASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 C8orf49-201ENST00000525043 1968 ntBASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 AC005252.2-201ENST00000624630 1141 ntBASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 TCAF2P1-201ENST00000291129 2421 ntBASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 AC134312.5-201ENST00000568031 1313 ntBASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 CSF2RBP1-201ENST00000447905 391 ntBASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 AC079316.1-201ENST00000548397 411 ntBASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 AL583810.1-201ENST00000553344 1045 ntBASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms