Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 AC091812.2-201ENST00000619081 385 ntBASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 AL359183.1-201ENST00000623796 2132 ntBASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 AC006504.5-208ENST00000588784 2401 ntBASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3HCC1Q9Y3T6 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 RNU1-129P-201ENST00000384064 167 ntBASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 GPX1P2-201ENST00000429271 606 ntBASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 U1.21-201ENST00000580816 167 ntBASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 AC087481.3-201ENST00000602886 1894 ntBASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 AL009183.1-201ENST00000603760 355 ntBASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 AL139011.1-202ENST00000642063 584 ntBASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3HCC1Q9Y3T6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
R3HCC1Q9Y3T6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
R3HCC1Q9Y3T6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
R3HCC1Q9Y3T6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
R3HCC1Q9Y3T6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
R3HCC1Q9Y3T6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.02■□□□□ 0.47
R3HCC1Q9Y3T6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 CEND1P1-201ENST00000451006 455 ntBASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 AC112482.1-201ENST00000492080 688 ntBASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 AP002472.1-201ENST00000577490 586 ntBASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 MIR3909-201ENST00000579518 119 ntBASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 AC079781.4-201ENST00000641908 219 ntBASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 AC092919.2-201ENST00000623631 1645 ntBASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 AC009090.5-201ENST00000624886 2285 ntBASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3HCC1Q9Y3T6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
R3HCC1Q9Y3T6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC18■□□□□ 0.47
R3HCC1Q9Y3T6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
R3HCC1Q9Y3T6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18■□□□□ 0.47
R3HCC1Q9Y3T6 KRT8P39-201ENST00000396270 1433 ntBASIC18■□□□□ 0.47
R3HCC1Q9Y3T6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC18■□□□□ 0.47
R3HCC1Q9Y3T6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18■□□□□ 0.47
R3HCC1Q9Y3T6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms