Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC004840.1-201ENST00000636359 365 ntBASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 AC104581.4-201ENST00000623126 3052 ntBASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 AC245100.3-201ENST00000441281 285 ntBASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 PHKG1P2-201ENST00000457537 863 ntBASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 SERBP1P5-201ENST00000510079 1181 ntBASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 SDHAP3-202ENST00000515467 728 ntBASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 AP005117.1-202ENST00000581724 1908 ntBASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPH3AQ9Y2J0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPH3AQ9Y2J0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms