Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 HLA-H-201ENST00000383620 1096 ntBASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 TPM4P1-201ENST00000436100 807 ntBASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 EEF1DP4-201ENST00000446006 880 ntBASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 AL390755.1-201ENST00000623716 2027 ntBASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 AZGP1P1-201ENST00000411909 902 ntBASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 SPDYE11-202ENST00000450699 704 ntBASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 RN7SL589P-201ENST00000481268 310 ntBASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 AC079140.1-201ENST00000508039 487 ntBASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 SPDYE9P-201ENST00000570642 692 ntBASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 AC027601.4-201ENST00000611259 610 ntBASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 SPDYE10P-202ENST00000612005 668 ntBASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 SPDYE8P-202ENST00000612377 668 ntBASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HDHD3Q9BSH5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 CICP11-201ENST00000434745 2827 ntBASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms