Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK1Q99986 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK1Q99986 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VRK1Q99986 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK1Q99986 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VRK1Q99986 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK1Q99986 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VRK1Q99986 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK1Q99986 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VRK1Q99986 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VRK1Q99986 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VRK1Q99986 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK1Q99986 AC006449.6-201ENST00000612330 2296 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
VRK1Q99986 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 AC100757.3-201ENST00000622361 1406 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
VRK1Q99986 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK1Q99986 GGT4P-201ENST00000623672 1708 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.9□□□□□ -0.18
VRK1Q99986 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK1Q99986 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
VRK1Q99986 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK1Q99986 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 AL035633.1-201ENST00000406139 838 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK1Q99986 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK1Q99986 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK1Q99986 COX20P2-201ENST00000452636 358 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 UGT1A2P-201ENST00000454886 866 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK1Q99986 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.9□□□□□ -0.18
VRK1Q99986 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK1Q99986 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK1Q99986 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK1Q99986 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK1Q99986 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK1Q99986 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK1Q99986 SPDYE12P-201ENST00000618416 771 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VRK1Q99986 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK1Q99986 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 PCGF3-213ENST00000620529 1899 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK1Q99986 CETN4P-206ENST00000642099 2168 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.9□□□□□ -0.18
VRK1Q99986 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VRK1Q99986 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 PRAL-201ENST00000624952 3286 ntBASIC13.9□□□□□ -0.18
VRK1Q99986 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VRK1Q99986 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VRK1Q99986 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK1Q99986 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
VRK1Q99986 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
VRK1Q99986 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
VRK1Q99986 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK1Q99986 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK1Q99986 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms