Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 HAUS4P1-201ENST00000406739 1145 ntBASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 AC117947.1-201ENST00000427448 529 ntBASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 SPDYE13P-201ENST00000445314 798 ntBASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 AC087641.1-201ENST00000557561 1021 ntBASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 AF228730.7-201ENST00000641842 219 ntBASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 AC113367.3-201ENST00000508316 1912 ntBASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 PRYP5-201ENST00000451909 266 ntBASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CROCCP3Q8IVE0 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms