Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 AC051619.9-201ENST00000623237 597 ntBASIC19.26■□□□□ 0.67
COL23A1Q86Y22 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 AC006449.6-201ENST00000612330 2296 ntBASIC19.25■□□□□ 0.67
COL23A1Q86Y22 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 AC097065.1-201ENST00000425737 517 ntBASIC19.25■□□□□ 0.67
COL23A1Q86Y22 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.25■□□□□ 0.67
COL23A1Q86Y22 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 AC141586.1-203ENST00000567242 366 ntBASIC19.25■□□□□ 0.67
COL23A1Q86Y22 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 AC138894.2-201ENST00000602838 371 ntBASIC19.25■□□□□ 0.67
COL23A1Q86Y22 AL136301.1-201ENST00000615830 422 ntBASIC19.25■□□□□ 0.67
COL23A1Q86Y22 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL23A1Q86Y22 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 RCC2P8-201ENST00000502779 1035 ntBASIC19.24■□□□□ 0.67
COL23A1Q86Y22 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 AC103810.10-201ENST00000606504 343 ntBASIC19.24■□□□□ 0.67
COL23A1Q86Y22 NAP1L6-202ENST00000641404 1222 ntBASIC19.24■□□□□ 0.67
COL23A1Q86Y22 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 AC055811.4-201ENST00000624039 1754 ntBASIC19.24■□□□□ 0.67
COL23A1Q86Y22 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL23A1Q86Y22 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 AC025271.4-201ENST00000621477 1726 ntBASIC19.23■□□□□ 0.67
COL23A1Q86Y22 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms