Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM50Q86XT4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 CYP2T1P-202ENST00000641596 2535 ntBASIC17.37■□□□□ 0.37
TRIM50Q86XT4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 AC007551.1-201ENST00000457394 519 ntBASIC17.37■□□□□ 0.37
TRIM50Q86XT4 GAPDHP40-201ENST00000505218 1006 ntBASIC17.37■□□□□ 0.37
TRIM50Q86XT4 AC092658.1-201ENST00000505836 891 ntBASIC17.37■□□□□ 0.37
TRIM50Q86XT4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 GNRHR2-203ENST00000581100 1187 ntBASIC17.37■□□□□ 0.37
TRIM50Q86XT4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 AL118508.1-201ENST00000613502 2345 ntBASIC17.37■□□□□ 0.37
TRIM50Q86XT4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM50Q86XT4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms