Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 SPDYE19P-201ENST00000338590 713 ntBASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 SPTLC1P1-201ENST00000447199 261 ntBASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 DOC2GP-202ENST00000514950 1163 ntBASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 AC239800.4-201ENST00000603712 296 ntBASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 TCAF2P1-201ENST00000291129 2421 ntBASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 AC090616.6-203ENST00000579186 1945 ntBASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 FAM45BP-202ENST00000592932 1624 ntBASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 AC020658.6-201ENST00000623564 1870 ntBASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 TOMM22P5-201ENST00000416399 439 ntBASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD3Q7Z3D4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 MEIS3P1-201ENST00000495167 958 ntBASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms