Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 RPL13AP25-201ENST00000484130 612 ntBASIC18.53■□□□□ 0.56
CTR9Q6PD62 GAPDHP40-201ENST00000505218 1006 ntBASIC18.53■□□□□ 0.56
CTR9Q6PD62 AC026410.3-201ENST00000514280 936 ntBASIC18.53■□□□□ 0.56
CTR9Q6PD62 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTR9Q6PD62 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTR9Q6PD62 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTR9Q6PD62 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTR9Q6PD62 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTR9Q6PD62 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTR9Q6PD62 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTR9Q6PD62 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTR9Q6PD62 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 TTTY23B-201ENST00000442790 549 ntBASIC18.52■□□□□ 0.56
CTR9Q6PD62 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 AC010319.3-201ENST00000597028 470 ntBASIC18.52■□□□□ 0.56
CTR9Q6PD62 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 CU634019.7-201ENST00000624153 1185 ntBASIC18.52■□□□□ 0.56
CTR9Q6PD62 FP236241.2-201ENST00000624906 1185 ntBASIC18.52■□□□□ 0.56
CTR9Q6PD62 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTR9Q6PD62 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTR9Q6PD62 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CTR9Q6PD62 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTR9Q6PD62 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CTR9Q6PD62 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CTR9Q6PD62 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.52■□□□□ 0.55
CTR9Q6PD62 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.52■□□□□ 0.55
CTR9Q6PD62 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTR9Q6PD62 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.52■□□□□ 0.55
CTR9Q6PD62 C8orf49-201ENST00000525043 1968 ntBASIC18.51■□□□□ 0.55
CTR9Q6PD62 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 C1QBPP1-201ENST00000400117 770 ntBASIC18.51■□□□□ 0.55
CTR9Q6PD62 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 AC007389.4-201ENST00000454674 793 ntBASIC18.51■□□□□ 0.55
CTR9Q6PD62 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.51■□□□□ 0.55
CTR9Q6PD62 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTR9Q6PD62 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms