Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 FKBP4P6-201ENST00000457486 1332 ntBASIC19.33■□□□□ 0.69
RC3H1Q5TC82 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RC3H1Q5TC82 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RC3H1Q5TC82 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.32■□□□□ 0.68
RC3H1Q5TC82 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 MIR4683-201ENST00000579659 81 ntBASIC19.32■□□□□ 0.68
RC3H1Q5TC82 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 AL157791.1-201ENST00000553667 1699 ntBASIC19.32■□□□□ 0.68
RC3H1Q5TC82 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RC3H1Q5TC82 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 AL353637.1-201ENST00000451571 732 ntBASIC19.31■□□□□ 0.68
RC3H1Q5TC82 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 AC090164.2-201ENST00000611487 516 ntBASIC19.31■□□□□ 0.68
RC3H1Q5TC82 AL136295.7-201ENST00000619226 1200 ntBASIC19.31■□□□□ 0.68
RC3H1Q5TC82 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RC3H1Q5TC82 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RC3H1Q5TC82 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RC3H1Q5TC82 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RC3H1Q5TC82 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RC3H1Q5TC82 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
RC3H1Q5TC82 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms