Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
DCAF4L1Q3SXM0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DCAF4L1Q3SXM0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DCAF4L1Q3SXM0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
DCAF4L1Q3SXM0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DCAF4L1Q3SXM0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DCAF4L1Q3SXM0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
DCAF4L1Q3SXM0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
DCAF4L1Q3SXM0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
DCAF4L1Q3SXM0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 AP001889.1-201ENST00000525414 633 ntBASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 AL359881.2-201ENST00000602973 570 ntBASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 AL512343.1-201ENST00000605837 169 ntBASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DCAF4L1Q3SXM0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 PRAL-201ENST00000624952 3286 ntBASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 AC134312.5-201ENST00000568031 1313 ntBASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 MIR6805-201ENST00000615055 62 ntBASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 AP005019.2-201ENST00000615104 511 ntBASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 AC105250.1-201ENST00000509378 2057 ntBASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.82■□□□□ 0.28
DCAF4L1Q3SXM0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 KRT18P25-201ENST00000508931 1278 ntBASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
DCAF4L1Q3SXM0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms