Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.84■□□□□ 0.13
PRAMEP78395 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRAMEP78395 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PRAMEP78395 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.84■□□□□ 0.13
PRAMEP78395 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRAMEP78395 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PRAMEP78395 OR2I1P-209ENST00000641730 5365 ntBASIC15.83■□□□□ 0.13
PRAMEP78395 AC099063.4-201ENST00000641099 1602 ntBASIC15.83■□□□□ 0.13
PRAMEP78395 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRAMEP78395 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRAMEP78395 AC009090.5-201ENST00000624886 2285 ntBASIC15.83■□□□□ 0.13
PRAMEP78395 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRAMEP78395 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PRAMEP78395 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 AC136604.1-201ENST00000418535 575 ntBASIC15.83■□□□□ 0.12
PRAMEP78395 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEP78395 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEP78395 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PRAMEP78395 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.83■□□□□ 0.12
PRAMEP78395 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.83■□□□□ 0.12
PRAMEP78395 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.83■□□□□ 0.12
PRAMEP78395 AC109322.1-201ENST00000524499 1264 ntBASIC15.83■□□□□ 0.12
PRAMEP78395 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEP78395 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEP78395 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PRAMEP78395 AC025678.2-201ENST00000562061 970 ntBASIC15.83■□□□□ 0.12
PRAMEP78395 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEP78395 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEP78395 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.83■□□□□ 0.12
PRAMEP78395 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.83■□□□□ 0.12
PRAMEP78395 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PRAMEP78395 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 AL607033.1-201ENST00000623900 1599 ntBASIC15.83■□□□□ 0.12
PRAMEP78395 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEP78395 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PRAMEP78395 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRAMEP78395 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEP78395 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEP78395 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 SERBP1P3-201ENST00000459980 809 ntBASIC15.82■□□□□ 0.12
PRAMEP78395 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.82■□□□□ 0.12
PRAMEP78395 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.82■□□□□ 0.12
PRAMEP78395 MIR6069-201ENST00000620069 79 ntBASIC15.82■□□□□ 0.12
PRAMEP78395 Z92544.3-201ENST00000624747 417 ntBASIC15.82■□□□□ 0.12
PRAMEP78395 AC097376.2-205ENST00000610159 5334 ntBASIC15.82■□□□□ 0.12
PRAMEP78395 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PRAMEP78395 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms