Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXD12P35452 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXD12P35452 AC108725.1-201ENST00000495472 409 ntBASIC15.66■□□□□ 0.1
HOXD12P35452 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXD12P35452 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXD12P35452 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
HOXD12P35452 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXD12P35452 AL049840.4-201ENST00000602422 811 ntBASIC15.66■□□□□ 0.1
HOXD12P35452 RHOXF1P1-202ENST00000635473 501 ntBASIC15.66■□□□□ 0.1
HOXD12P35452 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXD12P35452 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HOXD12P35452 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXD12P35452 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXD12P35452 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HOXD12P35452 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXD12P35452 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HOXD12P35452 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXD12P35452 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXD12P35452 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
HOXD12P35452 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXD12P35452 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXD12P35452 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXD12P35452 AC074338.1-201ENST00000416825 156 ntBASIC15.65■□□□□ 0.1
HOXD12P35452 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.65■□□□□ 0.1
HOXD12P35452 SLED1-202ENST00000512051 380 ntBASIC15.65■□□□□ 0.1
HOXD12P35452 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
HOXD12P35452 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXD12P35452 AC008687.7-202ENST00000637404 953 ntBASIC15.65■□□□□ 0.1
HOXD12P35452 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
HOXD12P35452 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXD12P35452 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXD12P35452 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.65■□□□□ 0.1
HOXD12P35452 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HOXD12P35452 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXD12P35452 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXD12P35452 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.64■□□□□ 0.09
HOXD12P35452 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HOXD12P35452 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXD12P35452 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXD12P35452 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXD12P35452 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXD12P35452 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
HOXD12P35452 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HOXD12P35452 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXD12P35452 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXD12P35452 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXD12P35452 AC099548.2-209ENST00000480264 625 ntBASIC15.64■□□□□ 0.09
HOXD12P35452 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.64■□□□□ 0.09
HOXD12P35452 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HOXD12P35452 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms