Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
DEFA4P12838 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
DEFA4P12838 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 AL671277.1-201ENST00000429656 993 ntBASIC12.8□□□□□ -0.36
DEFA4P12838 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA4P12838 RN7SL589P-201ENST00000481268 310 ntBASIC12.8□□□□□ -0.36
DEFA4P12838 KRT18P58-201ENST00000527480 1120 ntBASIC12.8□□□□□ -0.36
DEFA4P12838 AC024267.1-201ENST00000582320 895 ntBASIC12.8□□□□□ -0.36
DEFA4P12838 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.8□□□□□ -0.36
DEFA4P12838 AC091812.2-201ENST00000619081 385 ntBASIC12.8□□□□□ -0.36
DEFA4P12838 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.8□□□□□ -0.36
DEFA4P12838 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
DEFA4P12838 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
DEFA4P12838 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA4P12838 AL359258.3-201ENST00000622910 2331 ntBASIC12.8□□□□□ -0.36
DEFA4P12838 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 AKAP8P1-201ENST00000434743 1349 ntBASIC12.8□□□□□ -0.36
DEFA4P12838 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA4P12838 AC092127.1-201ENST00000567093 3455 ntBASIC12.8□□□□□ -0.36
DEFA4P12838 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DEFA4P12838 FAM45BP-202ENST00000592932 1624 ntBASIC12.8□□□□□ -0.36
DEFA4P12838 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA4P12838 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.8□□□□□ -0.36
DEFA4P12838 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA4P12838 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA4P12838 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 TMBIM7P-203ENST00000641617 1718 ntBASIC12.79□□□□□ -0.36
DEFA4P12838 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.79□□□□□ -0.36
DEFA4P12838 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.79□□□□□ -0.36
DEFA4P12838 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 FAM58CP-201ENST00000435741 640 ntBASIC12.79□□□□□ -0.36
DEFA4P12838 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 AC245100.5-201ENST00000452108 331 ntBASIC12.79□□□□□ -0.36
DEFA4P12838 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.79□□□□□ -0.36
DEFA4P12838 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.79□□□□□ -0.36
DEFA4P12838 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.79□□□□□ -0.36
DEFA4P12838 IGHV3-62-201ENST00000520057 340 ntBASIC12.79□□□□□ -0.36
DEFA4P12838 AC105233.2-201ENST00000523697 349 ntBASIC12.79□□□□□ -0.36
DEFA4P12838 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 AF228730.5-201ENST00000530288 346 ntBASIC12.79□□□□□ -0.36
DEFA4P12838 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms