Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 ENPP7P5-201ENST00000541031 1031 ntBASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 AL365203.3-201ENST00000609742 2057 ntBASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.16■□□□□ 0.34
SRGAP2CP0DJJ0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 ARSEP1-201ENST00000420443 635 ntBASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 AC026410.3-201ENST00000514280 936 ntBASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 TDH-203ENST00000531764 1110 ntBASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 AL008721.1-201ENST00000609964 604 ntBASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 FLJ16779-201ENST00000612722 7638 ntBASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.15■□□□□ 0.34
SRGAP2CP0DJJ0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
SRGAP2CP0DJJ0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SRGAP2CP0DJJ0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 ACTG1P3-201ENST00000431775 1114 ntBASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 RAB43P1-201ENST00000561790 589 ntBASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 AC015936.2-201ENST00000593177 259 ntBASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SRGAP2CP0DJJ0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms