Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
KRT6AP02538 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6AP02538 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KRT6AP02538 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT6AP02538 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6AP02538 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KRT6AP02538 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT6AP02538 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
KRT6AP02538 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT6AP02538 BANF1P1-201ENST00000553684 263 ntBASIC15.21■□□□□ 0.03
KRT6AP02538 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT6AP02538 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT6AP02538 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
KRT6AP02538 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6AP02538 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6AP02538 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT6AP02538 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6AP02538 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT6AP02538 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6AP02538 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
KRT6AP02538 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6AP02538 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT6AP02538 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT6AP02538 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT6AP02538 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.21■□□□□ 0.02
KRT6AP02538 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KRT6AP02538 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
KRT6AP02538 TNRC18P2-201ENST00000417666 2714 ntBASIC15.21■□□□□ 0.02
KRT6AP02538 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KRT6AP02538 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
KRT6AP02538 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
KRT6AP02538 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
KRT6AP02538 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT6AP02538 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.2■□□□□ 0.02
KRT6AP02538 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
KRT6AP02538 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT6AP02538 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT6AP02538 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT6AP02538 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 AC026150.2-201ENST00000564693 1156 ntBASIC15.2■□□□□ 0.02
KRT6AP02538 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 RN7SL828P-201ENST00000607615 303 ntBASIC15.2■□□□□ 0.02
KRT6AP02538 AC009093.7-201ENST00000623853 1223 ntBASIC15.2■□□□□ 0.02
KRT6AP02538 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.2■□□□□ 0.02
KRT6AP02538 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT6AP02538 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
KRT6AP02538 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
KRT6AP02538 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
KRT6AP02538 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT6AP02538 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT6AP02538 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT6AP02538 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
KRT6AP02538 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT6AP02538 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
KRT6AP02538 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
KRT6AP02538 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.19■□□□□ 0.02
KRT6AP02538 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT6AP02538 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT6AP02538 BX842568.4-201ENST00000421222 227 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms