Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX39AO00148 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 KRT8P22-201ENST00000562317 1415 ntBASIC17.56■□□□□ 0.4
DDX39AO00148 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX39AO00148 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DDX39AO00148 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DDX39AO00148 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 GK-202ENST00000378941 458 ntTSL 3 BASIC17.56■□□□□ 0.4
DDX39AO00148 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 C1QBPP1-201ENST00000400117 770 ntBASIC17.56■□□□□ 0.4
DDX39AO00148 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 U91328.1-201ENST00000437528 223 ntBASIC17.56■□□□□ 0.4
DDX39AO00148 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
DDX39AO00148 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.56■□□□□ 0.4
DDX39AO00148 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.56■□□□□ 0.4
DDX39AO00148 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX39AO00148 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX39AO00148 AC120045.2-201ENST00000567334 178 ntBASIC17.56■□□□□ 0.4
DDX39AO00148 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX39AO00148 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX39AO00148 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX39AO00148 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX39AO00148 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX39AO00148 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX39AO00148 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
DDX39AO00148 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.55■□□□□ 0.4
DDX39AO00148 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX39AO00148 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX39AO00148 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX39AO00148 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX39AO00148 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.55■□□□□ 0.4
DDX39AO00148 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX39AO00148 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
DDX39AO00148 AC124283.3-201ENST00000570869 594 ntBASIC17.55■□□□□ 0.4
DDX39AO00148 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX39AO00148 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX39AO00148 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 RPSAP52-203ENST00000622976 1023 ntBASIC17.55■□□□□ 0.4
DDX39AO00148 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
DDX39AO00148 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX39AO00148 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DDX39AO00148 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX39AO00148 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX39AO00148 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX39AO00148 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
DDX39AO00148 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
DDX39AO00148 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX39AO00148 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX39AO00148 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX39AO00148 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DDX39AO00148 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms