Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 HMGA1P7-201ENST00000406908 502 ntBASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 AL645939.2-201ENST00000427340 991 ntBASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 KRT18P34-201ENST00000488218 1270 ntBASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 AL049840.3-201ENST00000602669 611 ntBASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGB1Q9Y5G3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDHGB1Q9Y5G3 MIR4321-201ENST00000592276 80 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms