Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 AC018695.7-201ENST00000624587 2492 ntBASIC15.48■□□□□ 0.07
NCDNQ9UBB6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 IQSEC3P1-201ENST00000538799 536 ntBASIC15.48■□□□□ 0.07
NCDNQ9UBB6 AP005019.2-201ENST00000615104 511 ntBASIC15.48■□□□□ 0.07
NCDNQ9UBB6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCDNQ9UBB6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 AC092053.1-201ENST00000605787 1936 ntBASIC15.47■□□□□ 0.07
NCDNQ9UBB6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 HSPB1P2-201ENST00000448722 546 ntBASIC15.47■□□□□ 0.07
NCDNQ9UBB6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 AC026410.3-201ENST00000514280 936 ntBASIC15.47■□□□□ 0.07
NCDNQ9UBB6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 AC015910.1-201ENST00000579400 975 ntBASIC15.47■□□□□ 0.07
NCDNQ9UBB6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 AC092068.3-201ENST00000587894 2016 ntBASIC15.47■□□□□ 0.07
NCDNQ9UBB6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCDNQ9UBB6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 KRT8P35-201ENST00000483942 1338 ntBASIC15.46■□□□□ 0.07
NCDNQ9UBB6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 GGT4P-201ENST00000623672 1708 ntBASIC15.46■□□□□ 0.07
NCDNQ9UBB6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 AC069218.1-201ENST00000435269 762 ntBASIC15.46■□□□□ 0.07
NCDNQ9UBB6 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 KRT18P43-201ENST00000469825 1281 ntBASIC15.46■□□□□ 0.07
NCDNQ9UBB6 AC044849.1-201ENST00000519737 1188 ntBASIC15.46■□□□□ 0.07
NCDNQ9UBB6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 AC107373.2-201ENST00000607735 490 ntBASIC15.46■□□□□ 0.07
NCDNQ9UBB6 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms