Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 AC092384.3-202ENST00000564646 2873 ntBASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 AL162726.2-201ENST00000438986 1017 ntBASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 AC026410.3-201ENST00000514280 936 ntBASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 AC092850.2-201ENST00000623821 2697 ntBASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 C1QBPP1-201ENST00000400117 770 ntBASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 RPL13AP25-201ENST00000484130 612 ntBASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 USP32P1-208ENST00000506594 1164 ntBASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 AC106886.1-201ENST00000568660 600 ntBASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 AC105250.1-201ENST00000509378 2057 ntBASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMG20BQ9P0W2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 TMBIM7P-203ENST00000641617 1718 ntBASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 GAPDHP40-201ENST00000505218 1006 ntBASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 KRT17P8-201ENST00000540749 863 ntBASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 MIR5189-201ENST00000577370 114 ntBASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 CLUHP6-201ENST00000580789 941 ntBASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms