Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CD248Q9HCU0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD248Q9HCU0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 AP005117.1-202ENST00000581724 1908 ntBASIC16.53■□□□□ 0.24
CD248Q9HCU0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 AL391256.1-201ENST00000443260 1855 ntBASIC16.53■□□□□ 0.24
CD248Q9HCU0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 MTND6P24-201ENST00000440466 518 ntBASIC16.53■□□□□ 0.24
CD248Q9HCU0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 MEIS3P1-201ENST00000495167 958 ntBASIC16.53■□□□□ 0.24
CD248Q9HCU0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 RNA5SP410-201ENST00000516285 106 ntBASIC16.53■□□□□ 0.24
CD248Q9HCU0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 AL596087.1-201ENST00000400979 1969 ntBASIC16.53■□□□□ 0.24
CD248Q9HCU0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.53■□□□□ 0.24
CD248Q9HCU0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD248Q9HCU0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms