Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SLIRPQ9GZT3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 RPL5P21-201ENST00000404620 815 ntBASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 Z69720.1-201ENST00000601483 472 ntBASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLIRPQ9GZT3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 AC055811.4-201ENST00000624039 1754 ntBASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 AC118758.2-201ENST00000614242 2813 ntBASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 KRT17P6-201ENST00000453795 1220 ntBASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 TMEM198B-204ENST00000484016 896 ntBASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 AC243562.2-201ENST00000561247 970 ntBASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.76□□□□□ -0.21
SLIRPQ9GZT3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms