Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.96■□□□□ 0.47
ARID3AQ99856 AL139385.1-201ENST00000611744 3272 ntBASIC17.96■□□□□ 0.47
ARID3AQ99856 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ARID3AQ99856 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 MIR940-201ENST00000401276 94 ntBASIC17.96■□□□□ 0.47
ARID3AQ99856 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ARID3AQ99856 HMGA1P7-201ENST00000406908 502 ntBASIC17.96■□□□□ 0.47
ARID3AQ99856 HCG4-201ENST00000418983 998 ntBASIC17.96■□□□□ 0.47
ARID3AQ99856 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.96■□□□□ 0.47
ARID3AQ99856 AC027601.4-201ENST00000611259 610 ntBASIC17.96■□□□□ 0.47
ARID3AQ99856 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.96■□□□□ 0.47
ARID3AQ99856 AL513190.1-201ENST00000621254 727 ntBASIC17.96■□□□□ 0.47
ARID3AQ99856 AC004877.2-201ENST00000623941 599 ntBASIC17.96■□□□□ 0.47
ARID3AQ99856 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC17.96■□□□□ 0.47
ARID3AQ99856 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ARID3AQ99856 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ARID3AQ99856 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.96■□□□□ 0.47
ARID3AQ99856 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.96■□□□□ 0.46
ARID3AQ99856 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.96■□□□□ 0.46
ARID3AQ99856 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC17.95■□□□□ 0.46
ARID3AQ99856 AC136621.1-201ENST00000624017 2304 ntBASIC17.95■□□□□ 0.46
ARID3AQ99856 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 GRK6P1-201ENST00000400595 1711 ntBASIC17.95■□□□□ 0.46
ARID3AQ99856 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.95■□□□□ 0.46
ARID3AQ99856 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.95■□□□□ 0.46
ARID3AQ99856 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
ARID3AQ99856 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ARID3AQ99856 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.95■□□□□ 0.46
ARID3AQ99856 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.95■□□□□ 0.46
ARID3AQ99856 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.95■□□□□ 0.46
ARID3AQ99856 MIR4515-201ENST00000584082 81 ntBASIC17.95■□□□□ 0.46
ARID3AQ99856 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.95■□□□□ 0.46
ARID3AQ99856 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.95■□□□□ 0.46
ARID3AQ99856 AC092865.6-201ENST00000642101 219 ntBASIC17.95■□□□□ 0.46
ARID3AQ99856 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.95■□□□□ 0.46
ARID3AQ99856 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 AC004899.2-201ENST00000622993 3860 ntBASIC17.95■□□□□ 0.46
ARID3AQ99856 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.95■□□□□ 0.46
ARID3AQ99856 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARID3AQ99856 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ARID3AQ99856 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.95■□□□□ 0.46
ARID3AQ99856 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.94■□□□□ 0.46
ARID3AQ99856 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARID3AQ99856 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARID3AQ99856 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARID3AQ99856 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARID3AQ99856 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARID3AQ99856 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ARID3AQ99856 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARID3AQ99856 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ARID3AQ99856 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.94■□□□□ 0.46
ARID3AQ99856 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARID3AQ99856 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.94■□□□□ 0.46
ARID3AQ99856 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ARID3AQ99856 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.94■□□□□ 0.46
ARID3AQ99856 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ARID3AQ99856 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.94■□□□□ 0.46
ARID3AQ99856 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ARID3AQ99856 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.94■□□□□ 0.46
ARID3AQ99856 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.94■□□□□ 0.46
ARID3AQ99856 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ARID3AQ99856 KRT18P3-201ENST00000451602 1288 ntBASIC17.94■□□□□ 0.46
ARID3AQ99856 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
ARID3AQ99856 POLD2P1-201ENST00000511220 997 ntBASIC17.94■□□□□ 0.46
ARID3AQ99856 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms