Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 AL161645.1-201ENST00000622716 1255 ntBASIC16.19■□□□□ 0.18
C9orf72Q96LT7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 CYMP-203ENST00000474680 1263 ntBASIC16.18■□□□□ 0.18
C9orf72Q96LT7 RN7SL589P-201ENST00000481268 310 ntBASIC16.18■□□□□ 0.18
C9orf72Q96LT7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 RARRES2P8-201ENST00000566335 367 ntBASIC16.18■□□□□ 0.18
C9orf72Q96LT7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 AC061975.2-201ENST00000581722 295 ntBASIC16.18■□□□□ 0.18
C9orf72Q96LT7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 AC093028.1-201ENST00000622998 982 ntBASIC16.18■□□□□ 0.18
C9orf72Q96LT7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 AC126365.1-201ENST00000578585 1514 ntBASIC16.18■□□□□ 0.18
C9orf72Q96LT7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 AKAP8P1-201ENST00000434743 1349 ntBASIC16.18■□□□□ 0.18
C9orf72Q96LT7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.18■□□□□ 0.18
C9orf72Q96LT7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 LINC00552-201ENST00000625151 2579 ntBASIC16.17■□□□□ 0.18
C9orf72Q96LT7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 HLA-J-203ENST00000494367 1087 ntBASIC16.17■□□□□ 0.18
C9orf72Q96LT7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 AC004449.1-201ENST00000564240 433 ntBASIC16.17■□□□□ 0.18
C9orf72Q96LT7 AL135744.1-201ENST00000565098 629 ntBASIC16.17■□□□□ 0.18
C9orf72Q96LT7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 FOXO1B-201ENST00000504678 1527 ntBASIC16.17■□□□□ 0.18
C9orf72Q96LT7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms