Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 AC106794.1-201ENST00000506935 792 ntBASIC16.84■□□□□ 0.29
LRCH3Q96II8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 AL139384.1-201ENST00000612143 3047 ntBASIC16.84■□□□□ 0.29
LRCH3Q96II8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRCH3Q96II8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRCH3Q96II8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRCH3Q96II8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRCH3Q96II8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
LRCH3Q96II8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.83■□□□□ 0.28
LRCH3Q96II8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.83■□□□□ 0.28
LRCH3Q96II8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.83■□□□□ 0.28
LRCH3Q96II8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRCH3Q96II8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LRCH3Q96II8 KRT8P35-201ENST00000483942 1338 ntBASIC16.83■□□□□ 0.28
LRCH3Q96II8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC16.83■□□□□ 0.28
LRCH3Q96II8 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 AC020922.3-201ENST00000595064 547 ntBASIC16.83■□□□□ 0.28
LRCH3Q96II8 AP005019.2-201ENST00000615104 511 ntBASIC16.83■□□□□ 0.28
LRCH3Q96II8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRCH3Q96II8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
LRCH3Q96II8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH3Q96II8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 DRD5P1-201ENST00000456605 1438 ntBASIC16.82■□□□□ 0.28
LRCH3Q96II8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 CICP6-201ENST00000457191 2729 ntBASIC16.82■□□□□ 0.28
LRCH3Q96II8 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 ALG1L13P-202ENST00000519320 584 ntBASIC16.82■□□□□ 0.28
LRCH3Q96II8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 AC093813.1-201ENST00000605066 256 ntBASIC16.82■□□□□ 0.28
LRCH3Q96II8 MIR6842-201ENST00000612539 65 ntBASIC16.82■□□□□ 0.28
LRCH3Q96II8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.82■□□□□ 0.28
LRCH3Q96II8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH3Q96II8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
LRCH3Q96II8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms