Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
AP3S1Q92572 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP3S1Q92572 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S1Q92572 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
AP3S1Q92572 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.85□□□□□ -0.19
AP3S1Q92572 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.85□□□□□ -0.19
AP3S1Q92572 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.85□□□□□ -0.19
AP3S1Q92572 RNU1-129P-201ENST00000384064 167 ntBASIC13.85□□□□□ -0.19
AP3S1Q92572 PMS2P4-201ENST00000412466 1052 ntBASIC13.85□□□□□ -0.19
AP3S1Q92572 IGHV3-47-201ENST00000425060 335 ntBASIC13.85□□□□□ -0.19
AP3S1Q92572 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S1Q92572 AL136038.3-201ENST00000561909 1096 ntBASIC13.85□□□□□ -0.19
AP3S1Q92572 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S1Q92572 MIR4313-201ENST00000580760 101 ntBASIC13.85□□□□□ -0.19
AP3S1Q92572 U1.21-201ENST00000580816 167 ntBASIC13.85□□□□□ -0.19
AP3S1Q92572 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.85□□□□□ -0.19
AP3S1Q92572 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S1Q92572 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
AP3S1Q92572 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
AP3S1Q92572 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S1Q92572 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S1Q92572 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.84□□□□□ -0.19
AP3S1Q92572 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
AP3S1Q92572 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 AC073508.3-201ENST00000619697 1419 ntBASIC13.84□□□□□ -0.19
AP3S1Q92572 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S1Q92572 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
AP3S1Q92572 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.84□□□□□ -0.19
AP3S1Q92572 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.84□□□□□ -0.19
AP3S1Q92572 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S1Q92572 AC243562.2-201ENST00000561247 970 ntBASIC13.84□□□□□ -0.19
AP3S1Q92572 AL031055.1-201ENST00000606362 631 ntBASIC13.84□□□□□ -0.19
AP3S1Q92572 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S1Q92572 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S1Q92572 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
AP3S1Q92572 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S1Q92572 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
AP3S1Q92572 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
AP3S1Q92572 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S1Q92572 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
AP3S1Q92572 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.83□□□□□ -0.19
AP3S1Q92572 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.83□□□□□ -0.19
AP3S1Q92572 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP3S1Q92572 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP3S1Q92572 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP3S1Q92572 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP3S1Q92572 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP3S1Q92572 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP3S1Q92572 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
AP3S1Q92572 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.83□□□□□ -0.2
AP3S1Q92572 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.83□□□□□ -0.2
AP3S1Q92572 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms