Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 CICP14-201ENST00000629111 2732 ntBASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3C3Q8NEB9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 AC074386.1-202ENST00000463561 864 ntBASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 AC068137.2-201ENST00000605408 478 ntBASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 FGD5P1-202ENST00000614866 2498 ntBASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3C3Q8NEB9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIK3C3Q8NEB9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms