Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLX4Q8IY92 SHC1P1-201ENST00000425230 1745 ntBASIC18.62■□□□□ 0.57
SLX4Q8IY92 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLX4Q8IY92 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLX4Q8IY92 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLX4Q8IY92 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.62■□□□□ 0.57
SLX4Q8IY92 AC010141.1-201ENST00000411585 623 ntBASIC18.62■□□□□ 0.57
SLX4Q8IY92 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 COX6A1P2-201ENST00000620597 330 ntBASIC18.62■□□□□ 0.57
SLX4Q8IY92 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLX4Q8IY92 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLX4Q8IY92 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLX4Q8IY92 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLX4Q8IY92 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLX4Q8IY92 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 TUBB8P8-201ENST00000458717 1058 ntBASIC18.61■□□□□ 0.57
SLX4Q8IY92 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 AC242376.1-201ENST00000559033 726 ntBASIC18.61■□□□□ 0.57
SLX4Q8IY92 MIR4754-201ENST00000582477 89 ntBASIC18.61■□□□□ 0.57
SLX4Q8IY92 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 AC138894.2-201ENST00000602838 371 ntBASIC18.61■□□□□ 0.57
SLX4Q8IY92 HLA-C-210ENST00000640219 976 ntBASIC18.61■□□□□ 0.57
SLX4Q8IY92 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 E2F3P2-201ENST00000447755 1422 ntBASIC18.61■□□□□ 0.57
SLX4Q8IY92 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLX4Q8IY92 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.61■□□□□ 0.57
SLX4Q8IY92 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 RPL13AP19-201ENST00000434320 584 ntBASIC18.6■□□□□ 0.57
SLX4Q8IY92 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.6■□□□□ 0.57
SLX4Q8IY92 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 Z98259.2-201ENST00000641583 609 ntBASIC18.6■□□□□ 0.57
SLX4Q8IY92 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLX4Q8IY92 RN7SL8P-201ENST00000461771 266 ntBASIC18.6■□□□□ 0.57
SLX4Q8IY92 RPL18P13-201ENST00000478088 569 ntBASIC18.6■□□□□ 0.57
SLX4Q8IY92 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.6■□□□□ 0.57
SLX4Q8IY92 SNORD3B-2-202ENST00000571722 791 ntBASIC18.6■□□□□ 0.57
SLX4Q8IY92 RN7SL163P-201ENST00000583100 276 ntBASIC18.6■□□□□ 0.57
SLX4Q8IY92 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms