Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AC023024.2-201ENST00000623561 1993 ntBASIC14.2□□□□□ -0.14
ATG4DQ86TL0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 AL133267.1-201ENST00000398220 340 ntBASIC14.19□□□□□ -0.14
ATG4DQ86TL0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.19□□□□□ -0.14
ATG4DQ86TL0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 AC002472.2-201ENST00000442739 958 ntBASIC14.19□□□□□ -0.14
ATG4DQ86TL0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 AL590560.3-201ENST00000623350 461 ntBASIC14.19□□□□□ -0.14
ATG4DQ86TL0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ATG4DQ86TL0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 AC091951.1-201ENST00000512854 2465 ntBASIC14.18□□□□□ -0.14
ATG4DQ86TL0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms