Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AP000842.3-202ENST00000569238 1080 ntBASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 SPTSSB-204ENST00000617024 1292 ntBASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AC007191.1-201ENST00000623179 2995 ntBASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AC134684.3-201ENST00000641758 218 ntBASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AL589702.1-201ENST00000641229 1509 ntBASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 LINC00528-201ENST00000600723 2160 ntBASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 AC142381.1-201ENST00000426099 345 ntBASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 AC069335.1-201ENST00000489972 472 ntBASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 AL365330.1-201ENST00000607459 531 ntBASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 CICP4-201ENST00000447359 2812 ntBASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
ATPAF1Q5TC12 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 AC090616.6-203ENST00000579186 1945 ntBASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms