Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H2BDP58876 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.77□□□□□ -0.52
HIST1H2BDP58876 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 ME3-201ENST00000323418 1068 ntTSL 5 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 CRYGFP-201ENST00000418459 633 ntBASIC11.77□□□□□ -0.53
HIST1H2BDP58876 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 ECEL1P2-202ENST00000465689 757 ntBASIC11.77□□□□□ -0.53
HIST1H2BDP58876 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 AC018442.1-201ENST00000421439 2061 ntBASIC11.77□□□□□ -0.53
HIST1H2BDP58876 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HIST1H2BDP58876 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.76□□□□□ -0.53
HIST1H2BDP58876 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 HBZP1-201ENST00000354915 429 ntBASIC11.76□□□□□ -0.53
HIST1H2BDP58876 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms