Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
WNT3AP56704 BTBD7P1-201ENST00000447253 1453 ntBASIC15.82■□□□□ 0.12
WNT3AP56704 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.82■□□□□ 0.12
WNT3AP56704 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.82■□□□□ 0.12
WNT3AP56704 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
WNT3AP56704 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.82■□□□□ 0.12
WNT3AP56704 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.82■□□□□ 0.12
WNT3AP56704 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.82■□□□□ 0.12
WNT3AP56704 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
WNT3AP56704 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
WNT3AP56704 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.82■□□□□ 0.12
WNT3AP56704 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
WNT3AP56704 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
WNT3AP56704 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
WNT3AP56704 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
WNT3AP56704 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
WNT3AP56704 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.82■□□□□ 0.12
WNT3AP56704 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.82■□□□□ 0.12
WNT3AP56704 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
WNT3AP56704 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
WNT3AP56704 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
WNT3AP56704 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.81■□□□□ 0.12
WNT3AP56704 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.81■□□□□ 0.12
WNT3AP56704 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.81■□□□□ 0.12
WNT3AP56704 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
WNT3AP56704 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.81■□□□□ 0.12
WNT3AP56704 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.81■□□□□ 0.12
WNT3AP56704 TIMM17BP1-201ENST00000545713 516 ntBASIC15.81■□□□□ 0.12
WNT3AP56704 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.81■□□□□ 0.12
WNT3AP56704 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.81■□□□□ 0.12
WNT3AP56704 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.81■□□□□ 0.12
WNT3AP56704 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.81■□□□□ 0.12
WNT3AP56704 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.81■□□□□ 0.12
WNT3AP56704 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.81■□□□□ 0.12
WNT3AP56704 AC023157.3-201ENST00000619086 2088 ntBASIC15.81■□□□□ 0.12
WNT3AP56704 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.81■□□□□ 0.12
WNT3AP56704 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
WNT3AP56704 NFIC-211ENST00000641145 8399 ntBASIC15.81■□□□□ 0.12
WNT3AP56704 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
WNT3AP56704 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.81■□□□□ 0.12
WNT3AP56704 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.81■□□□□ 0.12
WNT3AP56704 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.81■□□□□ 0.12
WNT3AP56704 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
WNT3AP56704 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.8■□□□□ 0.12
WNT3AP56704 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.8■□□□□ 0.12
WNT3AP56704 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
WNT3AP56704 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.8■□□□□ 0.12
WNT3AP56704 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
WNT3AP56704 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.8■□□□□ 0.12
WNT3AP56704 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.8■□□□□ 0.12
WNT3AP56704 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
WNT3AP56704 AL133267.1-201ENST00000398220 340 ntBASIC15.8■□□□□ 0.12
WNT3AP56704 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.8■□□□□ 0.12
WNT3AP56704 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.8■□□□□ 0.12
WNT3AP56704 FAM8A3P-201ENST00000427218 844 ntBASIC15.8■□□□□ 0.12
WNT3AP56704 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.8■□□□□ 0.12
WNT3AP56704 SPDYE18-201ENST00000510091 1050 ntBASIC15.8■□□□□ 0.12
WNT3AP56704 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.8■□□□□ 0.12
WNT3AP56704 AC135586.1-201ENST00000539323 574 ntBASIC15.8■□□□□ 0.12
WNT3AP56704 AC092337.1-201ENST00000568699 1129 ntBASIC15.8■□□□□ 0.12
WNT3AP56704 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
WNT3AP56704 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.8■□□□□ 0.12
WNT3AP56704 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
WNT3AP56704 AC004840.1-201ENST00000636359 365 ntBASIC15.8■□□□□ 0.12
WNT3AP56704 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.8■□□□□ 0.12
WNT3AP56704 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.8■□□□□ 0.12
WNT3AP56704 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
WNT3AP56704 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
WNT3AP56704 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.8■□□□□ 0.12
WNT3AP56704 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms