Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CDC34P49427 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CDC34P49427 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CDC34P49427 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.44□□□□□ -0.42
CDC34P49427 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.44□□□□□ -0.42
CDC34P49427 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.44□□□□□ -0.42
CDC34P49427 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 AL023775.1-201ENST00000454907 1746 ntBASIC12.44□□□□□ -0.42
CDC34P49427 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 AC015656.1-201ENST00000624209 3578 ntBASIC12.44□□□□□ -0.42
CDC34P49427 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CDC34P49427 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC34P49427 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDC34P49427 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC34P49427 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CDC34P49427 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CDC34P49427 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CDC34P49427 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.43□□□□□ -0.42
CDC34P49427 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.43□□□□□ -0.42
CDC34P49427 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.43□□□□□ -0.42
CDC34P49427 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.43□□□□□ -0.42
CDC34P49427 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CDC34P49427 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC34P49427 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CDC34P49427 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.43□□□□□ -0.42
CDC34P49427 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.43□□□□□ -0.42
CDC34P49427 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC34P49427 AL031133.1-201ENST00000406807 723 ntBASIC12.43□□□□□ -0.42
CDC34P49427 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC34P49427 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.43□□□□□ -0.42
CDC34P49427 AC093827.2-201ENST00000512654 315 ntBASIC12.43□□□□□ -0.42
CDC34P49427 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms