Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.47□□□□□ -0.25
CD40P25942 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.47□□□□□ -0.25
CD40P25942 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CD40P25942 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CD40P25942 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 LINC02199-201ENST00000506655 2702 ntBASIC13.47□□□□□ -0.25
CD40P25942 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 DRD5P1-201ENST00000456605 1438 ntBASIC13.47□□□□□ -0.25
CD40P25942 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CD40P25942 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
CD40P25942 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.46□□□□□ -0.25
CD40P25942 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CD40P25942 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.46□□□□□ -0.25
CD40P25942 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CD40P25942 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.46□□□□□ -0.25
CD40P25942 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CD40P25942 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.46□□□□□ -0.25
CD40P25942 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.46□□□□□ -0.25
CD40P25942 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.46□□□□□ -0.25
CD40P25942 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.46□□□□□ -0.25
CD40P25942 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CD40P25942 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.46□□□□□ -0.25
CD40P25942 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.46□□□□□ -0.25
CD40P25942 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.46□□□□□ -0.25
CD40P25942 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.46□□□□□ -0.25
CD40P25942 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.46□□□□□ -0.25
CD40P25942 SLC25A47P1-201ENST00000531577 414 ntBASIC13.46□□□□□ -0.25
CD40P25942 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.46□□□□□ -0.25
CD40P25942 PTP4A1P2-201ENST00000546033 454 ntBASIC13.46□□□□□ -0.25
CD40P25942 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.46□□□□□ -0.25
CD40P25942 AC009486.1-201ENST00000569860 813 ntBASIC13.46□□□□□ -0.25
CD40P25942 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.46□□□□□ -0.25
CD40P25942 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.46□□□□□ -0.25
CD40P25942 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CD40P25942 AC233724.13-201ENST00000598383 410 ntBASIC13.46□□□□□ -0.25
CD40P25942 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CD40P25942 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CD40P25942 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CD40P25942 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD40P25942 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CD40P25942 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CD40P25942 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CD40P25942 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD40P25942 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD40P25942 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CD40P25942 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CD40P25942 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD40P25942 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.46□□□□□ -0.26
CD40P25942 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CD40P25942 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CD40P25942 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms