Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
NF1P21359 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NF1P21359 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NF1P21359 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
NF1P21359 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.44□□□□□ -0.42
NF1P21359 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.44□□□□□ -0.42
NF1P21359 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.44□□□□□ -0.42
NF1P21359 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NF1P21359 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NF1P21359 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.44□□□□□ -0.42
NF1P21359 GCSHP3-201ENST00000431120 391 ntBASIC12.44□□□□□ -0.42
NF1P21359 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.44□□□□□ -0.42
NF1P21359 GAPDHP40-201ENST00000505218 1006 ntBASIC12.44□□□□□ -0.42
NF1P21359 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.44□□□□□ -0.42
NF1P21359 AP002490.2-201ENST00000524791 560 ntBASIC12.44□□□□□ -0.42
NF1P21359 AP003398.1-201ENST00000531124 318 ntBASIC12.44□□□□□ -0.42
NF1P21359 EMC4-208ENST00000559078 599 ntTSL 3 BASIC12.44□□□□□ -0.42
NF1P21359 AC055811.3-201ENST00000584952 686 ntBASIC12.44□□□□□ -0.42
NF1P21359 AC005632.3-201ENST00000605544 308 ntBASIC12.44□□□□□ -0.42
NF1P21359 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 SIGLEC20P-201ENST00000595243 1311 ntBASIC12.44□□□□□ -0.42
NF1P21359 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NF1P21359 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.44□□□□□ -0.42
NF1P21359 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NF1P21359 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.44□□□□□ -0.42
NF1P21359 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.44□□□□□ -0.42
NF1P21359 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.44□□□□□ -0.42
NF1P21359 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.44□□□□□ -0.42
NF1P21359 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.44□□□□□ -0.42
NF1P21359 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
NF1P21359 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC12.44□□□□□ -0.42
NF1P21359 FAM8A4P-201ENST00000435433 1213 ntBASIC12.44□□□□□ -0.42
NF1P21359 RNMTL1P1-201ENST00000454103 560 ntBASIC12.44□□□□□ -0.42
NF1P21359 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.44□□□□□ -0.42
NF1P21359 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.44□□□□□ -0.42
NF1P21359 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.44□□□□□ -0.42
NF1P21359 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.44□□□□□ -0.42
NF1P21359 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.44□□□□□ -0.42
NF1P21359 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 KRT8P4-201ENST00000509735 1454 ntBASIC12.44□□□□□ -0.42
NF1P21359 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NF1P21359 AC020916.1-201ENST00000587762 1774 ntBASIC12.44□□□□□ -0.42
NF1P21359 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NF1P21359 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NF1P21359 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NF1P21359 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.43□□□□□ -0.42
NF1P21359 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.43□□□□□ -0.42
NF1P21359 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.43□□□□□ -0.42
NF1P21359 AC018846.1-201ENST00000568231 183 ntBASIC12.43□□□□□ -0.42
NF1P21359 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NF1P21359 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.43□□□□□ -0.42
NF1P21359 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NF1P21359 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.43□□□□□ -0.42
NF1P21359 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.43□□□□□ -0.42
NF1P21359 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.43□□□□□ -0.42
NF1P21359 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.43□□□□□ -0.42
NF1P21359 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.43□□□□□ -0.42
NF1P21359 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 AL627231.1-201ENST00000394467 1125 ntBASIC12.43□□□□□ -0.42
NF1P21359 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC12.43□□□□□ -0.42
NF1P21359 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NF1P21359 AP001582.1-201ENST00000525856 295 ntBASIC12.43□□□□□ -0.42
NF1P21359 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.43□□□□□ -0.42
NF1P21359 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.43□□□□□ -0.42
NF1P21359 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.43□□□□□ -0.42
NF1P21359 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.43□□□□□ -0.42
NF1P21359 AL162426.1-201ENST00000624141 743 ntBASIC12.43□□□□□ -0.42
NF1P21359 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.43□□□□□ -0.42
NF1P21359 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NF1P21359 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms