Protein–RNA interactions for Protein: P13805

TNNT1, Troponin T, slow skeletal muscle, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT1P13805 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNNT1P13805 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TNNT1P13805 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNNT1P13805 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNNT1P13805 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNNT1P13805 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.29■□□□□ 0.36
TNNT1P13805 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNNT1P13805 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNNT1P13805 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNNT1P13805 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNNT1P13805 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.28■□□□□ 0.36
TNNT1P13805 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TNNT1P13805 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 AL928921.2-201ENST00000641325 2442 ntBASIC17.28■□□□□ 0.36
TNNT1P13805 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.28■□□□□ 0.36
TNNT1P13805 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.28■□□□□ 0.36
TNNT1P13805 AC136759.1-202ENST00000530858 2194 ntBASIC17.28■□□□□ 0.36
TNNT1P13805 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TNNT1P13805 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.28■□□□□ 0.36
TNNT1P13805 BX640514.1-201ENST00000583223 1918 ntBASIC17.28■□□□□ 0.36
TNNT1P13805 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 HMGA1P7-201ENST00000406908 502 ntBASIC17.28■□□□□ 0.36
TNNT1P13805 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.28■□□□□ 0.36
TNNT1P13805 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 CXCL1P1-201ENST00000502804 216 ntBASIC17.28■□□□□ 0.36
TNNT1P13805 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.28■□□□□ 0.36
TNNT1P13805 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.28■□□□□ 0.36
TNNT1P13805 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.28■□□□□ 0.36
TNNT1P13805 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.28■□□□□ 0.36
TNNT1P13805 MIR4515-201ENST00000584082 81 ntBASIC17.28■□□□□ 0.36
TNNT1P13805 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.28■□□□□ 0.36
TNNT1P13805 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.28■□□□□ 0.36
TNNT1P13805 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.28■□□□□ 0.36
TNNT1P13805 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNNT1P13805 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.27■□□□□ 0.36
TNNT1P13805 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TNNT1P13805 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.27■□□□□ 0.36
TNNT1P13805 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
TNNT1P13805 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.27■□□□□ 0.36
TNNT1P13805 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TNNT1P13805 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TNNT1P13805 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TNNT1P13805 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.27■□□□□ 0.36
TNNT1P13805 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.27■□□□□ 0.36
TNNT1P13805 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.27■□□□□ 0.36
TNNT1P13805 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.27■□□□□ 0.36
TNNT1P13805 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.27■□□□□ 0.36
TNNT1P13805 AC098831.1-202ENST00000438821 336 ntBASIC17.27■□□□□ 0.36
TNNT1P13805 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.27■□□□□ 0.36
TNNT1P13805 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.27■□□□□ 0.36
TNNT1P13805 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.27■□□□□ 0.36
TNNT1P13805 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.27■□□□□ 0.36
TNNT1P13805 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TNNT1P13805 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNNT1P13805 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNNT1P13805 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TNNT1P13805 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.27■□□□□ 0.35
TNNT1P13805 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNNT1P13805 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.27■□□□□ 0.35
TNNT1P13805 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms