Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH16O75309 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDH16O75309 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH16O75309 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH16O75309 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH16O75309 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH16O75309 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 AL136982.4-201ENST00000437689 1740 ntBASIC15.88■□□□□ 0.13
CDH16O75309 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH16O75309 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH16O75309 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH16O75309 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CDH16O75309 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH16O75309 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH16O75309 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH16O75309 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH16O75309 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDH16O75309 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CDH16O75309 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
CDH16O75309 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH16O75309 EEF1DP4-201ENST00000446006 880 ntBASIC15.87■□□□□ 0.13
CDH16O75309 AC105233.2-201ENST00000523697 349 ntBASIC15.87■□□□□ 0.13
CDH16O75309 AF228730.5-201ENST00000530288 346 ntBASIC15.87■□□□□ 0.13
CDH16O75309 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH16O75309 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH16O75309 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH16O75309 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDH16O75309 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDH16O75309 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDH16O75309 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH16O75309 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CDH16O75309 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH16O75309 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH16O75309 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH16O75309 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 AC104581.4-201ENST00000623126 3052 ntBASIC15.86■□□□□ 0.13
CDH16O75309 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH16O75309 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDH16O75309 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 ACE3P-201ENST00000423435 1973 ntBASIC15.86■□□□□ 0.13
CDH16O75309 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH16O75309 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.86■□□□□ 0.13
CDH16O75309 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH16O75309 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 AC009947.1-201ENST00000444350 727 ntBASIC15.86■□□□□ 0.13
CDH16O75309 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH16O75309 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH16O75309 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CDH16O75309 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH16O75309 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CDH16O75309 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDH16O75309 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDH16O75309 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH16O75309 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH16O75309 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH16O75309 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH16O75309 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH16O75309 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms