Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.64■□□□□ 0.09
PHGDHO43175 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.64■□□□□ 0.09
PHGDHO43175 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.64■□□□□ 0.09
PHGDHO43175 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.63■□□□□ 0.09
PHGDHO43175 LINC00528-201ENST00000600723 2160 ntBASIC15.63■□□□□ 0.09
PHGDHO43175 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
PHGDHO43175 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.63■□□□□ 0.09
PHGDHO43175 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.63■□□□□ 0.09
PHGDHO43175 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.63■□□□□ 0.09
PHGDHO43175 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PHGDHO43175 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.63■□□□□ 0.09
PHGDHO43175 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PHGDHO43175 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.63■□□□□ 0.09
PHGDHO43175 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PHGDHO43175 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.63■□□□□ 0.09
PHGDHO43175 AC004461.1-201ENST00000412461 403 ntBASIC15.63■□□□□ 0.09
PHGDHO43175 AC136604.1-201ENST00000418535 575 ntBASIC15.63■□□□□ 0.09
PHGDHO43175 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.63■□□□□ 0.09
PHGDHO43175 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.63■□□□□ 0.09
PHGDHO43175 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.63■□□□□ 0.09
PHGDHO43175 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.63■□□□□ 0.09
PHGDHO43175 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PHGDHO43175 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.63■□□□□ 0.09
PHGDHO43175 MIR4469-201ENST00000583919 79 ntBASIC15.63■□□□□ 0.09
PHGDHO43175 AL513210.1-201ENST00000629608 234 ntBASIC15.63■□□□□ 0.09
PHGDHO43175 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.63■□□□□ 0.09
PHGDHO43175 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
PHGDHO43175 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 PCDHA3-202ENST00000532566 4594 ntBASIC15.63■□□□□ 0.09
PHGDHO43175 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.63■□□□□ 0.09
PHGDHO43175 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PHGDHO43175 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PHGDHO43175 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PHGDHO43175 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.62■□□□□ 0.09
PHGDHO43175 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PHGDHO43175 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PHGDHO43175 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.62■□□□□ 0.09
PHGDHO43175 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PHGDHO43175 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.62■□□□□ 0.09
PHGDHO43175 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
PHGDHO43175 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PHGDHO43175 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.62■□□□□ 0.09
PHGDHO43175 AL627223.1-201ENST00000416693 442 ntBASIC15.62■□□□□ 0.09
PHGDHO43175 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.62■□□□□ 0.09
PHGDHO43175 AP000347.1-202ENST00000435868 847 ntBASIC15.62■□□□□ 0.09
PHGDHO43175 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.62■□□□□ 0.09
PHGDHO43175 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.62■□□□□ 0.09
PHGDHO43175 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.62■□□□□ 0.09
PHGDHO43175 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.62■□□□□ 0.09
PHGDHO43175 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 AC018529.1-201ENST00000613063 361 ntBASIC15.62■□□□□ 0.09
PHGDHO43175 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PHGDHO43175 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.62■□□□□ 0.09
PHGDHO43175 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PHGDHO43175 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PHGDHO43175 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms