Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.56■□□□□ 0.88
APAF1O14727 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.56■□□□□ 0.88
APAF1O14727 AL132655.2-201ENST00000596276 594 ntBASIC20.56■□□□□ 0.88
APAF1O14727 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.56■□□□□ 0.88
APAF1O14727 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.56■□□□□ 0.88
APAF1O14727 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APAF1O14727 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APAF1O14727 KRT8P44-201ENST00000441609 1350 ntBASIC20.56■□□□□ 0.88
APAF1O14727 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APAF1O14727 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APAF1O14727 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APAF1O14727 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.55■□□□□ 0.88
APAF1O14727 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
APAF1O14727 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 AC006486.2-201ENST00000624246 2199 ntBASIC20.55■□□□□ 0.88
APAF1O14727 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC20.55■□□□□ 0.88
APAF1O14727 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.55■□□□□ 0.88
APAF1O14727 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
APAF1O14727 AC093004.1-201ENST00000508850 424 ntBASIC20.55■□□□□ 0.88
APAF1O14727 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.55■□□□□ 0.88
APAF1O14727 API5-211ENST00000534695 560 ntTSL 5 BASIC20.55■□□□□ 0.88
APAF1O14727 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.55■□□□□ 0.88
APAF1O14727 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.55■□□□□ 0.88
APAF1O14727 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.55■□□□□ 0.88
APAF1O14727 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.55■□□□□ 0.88
APAF1O14727 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.55■□□□□ 0.88
APAF1O14727 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APAF1O14727 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
APAF1O14727 STRN-202ENST00000379213 2254 ntTSL 5 BASIC20.55■□□□□ 0.88
APAF1O14727 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC20.54■□□□□ 0.88
APAF1O14727 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
APAF1O14727 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
APAF1O14727 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
APAF1O14727 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.54■□□□□ 0.88
APAF1O14727 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC20.54■□□□□ 0.88
APAF1O14727 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.54■□□□□ 0.88
APAF1O14727 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
APAF1O14727 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.54■□□□□ 0.88
APAF1O14727 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.54■□□□□ 0.88
APAF1O14727 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.54■□□□□ 0.88
APAF1O14727 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
APAF1O14727 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 AC004233.3-201ENST00000607794 1269 ntBASIC20.54■□□□□ 0.88
APAF1O14727 AL662799.1-202ENST00000614205 422 ntBASIC20.54■□□□□ 0.88
APAF1O14727 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
APAF1O14727 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
APAF1O14727 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.54■□□□□ 0.88
APAF1O14727 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
APAF1O14727 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.54■□□□□ 0.88
APAF1O14727 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APAF1O14727 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
APAF1O14727 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
APAF1O14727 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
APAF1O14727 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 FAM86LP-201ENST00000478302 853 ntBASIC20.53■□□□□ 0.88
APAF1O14727 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
APAF1O14727 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.53■□□□□ 0.88
APAF1O14727 AC092364.2-202ENST00000597012 1073 ntBASIC20.53■□□□□ 0.88
APAF1O14727 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.53■□□□□ 0.88
APAF1O14727 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
APAF1O14727 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
APAF1O14727 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
APAF1O14727 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.53■□□□□ 0.88
APAF1O14727 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
APAF1O14727 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
APAF1O14727 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
APAF1O14727 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
APAF1O14727 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APAF1O14727 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms