Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UPK2O00526 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UPK2O00526 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
UPK2O00526 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.59□□□□□ -0.39
UPK2O00526 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.59□□□□□ -0.39
UPK2O00526 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.59□□□□□ -0.39
UPK2O00526 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.59□□□□□ -0.39
UPK2O00526 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 AC004461.1-201ENST00000412461 403 ntBASIC12.59□□□□□ -0.39
UPK2O00526 AL627223.1-201ENST00000416693 442 ntBASIC12.59□□□□□ -0.39
UPK2O00526 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 HIST3H2BA-201ENST00000436555 524 ntBASIC12.59□□□□□ -0.39
UPK2O00526 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.59□□□□□ -0.39
UPK2O00526 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.59□□□□□ -0.39
UPK2O00526 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.59□□□□□ -0.39
UPK2O00526 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.59□□□□□ -0.39
UPK2O00526 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
UPK2O00526 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.59□□□□□ -0.39
UPK2O00526 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.59□□□□□ -0.39
UPK2O00526 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UPK2O00526 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.58□□□□□ -0.39
UPK2O00526 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.58□□□□□ -0.39
UPK2O00526 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK2O00526 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.58□□□□□ -0.4
UPK2O00526 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK2O00526 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 CICP24-201ENST00000605464 2705 ntBASIC12.58□□□□□ -0.4
UPK2O00526 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.58□□□□□ -0.4
UPK2O00526 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK2O00526 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 RBPMS2P1-201ENST00000437762 623 ntBASIC12.58□□□□□ -0.4
UPK2O00526 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK2O00526 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK2O00526 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.58□□□□□ -0.4
UPK2O00526 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.58□□□□□ -0.4
UPK2O00526 RN7SL828P-201ENST00000607615 303 ntBASIC12.58□□□□□ -0.4
UPK2O00526 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.58□□□□□ -0.4
UPK2O00526 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
UPK2O00526 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.58□□□□□ -0.4
UPK2O00526 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
UPK2O00526 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms