Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 AL365203.3-201ENST00000609742 2057 ntBASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 PRAL-201ENST00000624952 3286 ntBASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 ARSEP1-201ENST00000420443 635 ntBASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 TTTY23B-201ENST00000442790 549 ntBASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 MIR8072-201ENST00000614241 80 ntBASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 AC022188.1-201ENST00000620960 1664 ntBASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA3F8WFD2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 EEF1DP4-201ENST00000446006 880 ntBASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms