Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CENPBD1B2RD01 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CENPBD1B2RD01 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CENPBD1B2RD01 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CENPBD1B2RD01 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.39□□□□□ -0.11
CENPBD1B2RD01 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.38□□□□□ -0.11
CENPBD1B2RD01 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 FOXO1B-201ENST00000504678 1527 ntBASIC14.38□□□□□ -0.11
CENPBD1B2RD01 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 HLA-H-201ENST00000383620 1096 ntBASIC14.38□□□□□ -0.11
CENPBD1B2RD01 SPCS2P4-201ENST00000436160 681 ntBASIC14.38□□□□□ -0.11
CENPBD1B2RD01 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.38□□□□□ -0.11
CENPBD1B2RD01 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPBD1B2RD01 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CENPBD1B2RD01 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms