Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 AC011467.4-201ENST00000594891 528 ntBASIC14.88□□□□□ -0.03
LRIT2A6NDA9 AL391069.4-201ENST00000609583 481 ntBASIC14.88□□□□□ -0.03
LRIT2A6NDA9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.88□□□□□ -0.03
LRIT2A6NDA9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.87□□□□□ -0.03
LRIT2A6NDA9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 TSPY16P-201ENST00000449843 468 ntBASIC14.87□□□□□ -0.03
LRIT2A6NDA9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 AC009118.2-201ENST00000613275 655 ntBASIC14.87□□□□□ -0.03
LRIT2A6NDA9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 AL158212.4-201ENST00000624062 1286 ntBASIC14.87□□□□□ -0.03
LRIT2A6NDA9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LRIT2A6NDA9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 SPDYE19P-201ENST00000338590 713 ntBASIC14.86□□□□□ -0.03
LRIT2A6NDA9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.86□□□□□ -0.03
LRIT2A6NDA9 SPTLC1P1-201ENST00000447199 261 ntBASIC14.86□□□□□ -0.03
LRIT2A6NDA9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms