Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 AL513523.2-202ENST00000427283 2040 ntBASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
LINC00588Q9Y4M8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 ACA64.2-201ENST00000459014 129 ntBASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 MIR5189-201ENST00000577370 114 ntBASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 AC017083.2-201ENST00000608069 979 ntBASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 RPSAP52-203ENST00000622976 1023 ntBASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00588Q9Y4M8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.7
LINC00588Q9Y4M8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00588Q9Y4M8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00588Q9Y4M8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00588Q9Y4M8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00588Q9Y4M8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00588Q9Y4M8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00588Q9Y4M8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC00588Q9Y4M8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms