Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VPS9D1Q9Y2B5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 NPM1P28-201ENST00000492269 840 ntBASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 AC004449.1-201ENST00000564240 433 ntBASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 AC090950.1-202ENST00000605733 644 ntBASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 AL691403.2-201ENST00000618460 490 ntBASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 AL033527.5-202ENST00000641632 1098 ntBASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 TUBB3P1-201ENST00000405796 1332 ntBASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS9D1Q9Y2B5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 AC023157.3-201ENST00000619086 2088 ntBASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 AC125807.1-201ENST00000483097 614 ntBASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms